CDS

Accession Number TCMCG015C42728
gbkey CDS
Protein Id XP_027076262.1
Location join(8876733..8876769,8877168..8877221,8877355..8877619,8877992..8878080,8878749..8878879,8879231..8879277,8879402..8879510,8879960..8880046,8880278..8880449,8881731..8882236,8882657..8882718,8882809..8882911,8882995..8883048)
Gene LOC113700041
GeneID 113700041
Organism Coffea arabica

Protein

Length 571aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027220461.1
Definition nijmegen breakage syndrome 1 protein-like isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category L
Description atnbs1,nbs1
KEGG_TC -
KEGG_Module M00291        [VIEW IN KEGG]
M00295        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10867        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03440        [VIEW IN KEGG]
ko04218        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
map04218        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000075        [VIEW IN EMBL-EBI]
GO:0000077        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000723        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0000781        [VIEW IN EMBL-EBI]
GO:0000784        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006312        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007095        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0010389        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0010972        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016233        [VIEW IN EMBL-EBI]
GO:0016234        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030870        [VIEW IN EMBL-EBI]
GO:0031570        [VIEW IN EMBL-EBI]
GO:0031572        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032200        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042405        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042770        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044773        [VIEW IN EMBL-EBI]
GO:0044774        [VIEW IN EMBL-EBI]
GO:0044818        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0047485        [VIEW IN EMBL-EBI]
GO:0048145        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060249        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071479        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901988        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1901991        [VIEW IN EMBL-EBI]
GO:1902749        [VIEW IN EMBL-EBI]
GO:1902750        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGTGGGGTCTCTTTCCCGTCGACCCTCTCCCAGGTGAAGATAGATACTACTTTTTCAGCAAAGGAACTTACAAAGTTGGTCGCAAAGGATGTGATATAATCATAAACAAAGACAAAGGTGTCTCGAGGATACATGCGGAGATTGTGATAGATGAAATGGTTTGCTTCGATAATCCACAGAGACAATCTTCAGATATATCCTCGAAAGTTCGGATAAGGGACTGCTCTAAGTATGGAACATTTGTCAAGAAGAATCTGGGGTCAAAGGAGAAGGTTCACGAGTTTCCAGAAAAAGAGACAATGCTCAAGGATGGGGACCTGGTTTCTTTTGGAACTGGAAATGCAACCTATAGATTTGGTTATGTTCCCTTCATAATTTTGTATTGCTGTTCAAAGGATTTGCAAGTCAGGGAACCACTTCGACAGAAGATATTGTCAATAGGTGCTTTTGTTGCTCAAGAGTGGAGTTTAAAGTGCACACATGTGCTGATTGATGATTTGGTTCCTTTGAAGGAAGAGTTAATTGATGCTATTGTGGCTAAAAAACCTTTCATCTCCTTTGACTGGATTGAGTTTATTGCAGGGAAAAACATATGCACGGAAATTCCAAGCTATTTGTCTTATTCTCCGACACTTTTGCTGGAAGAGGCATCTGTCAGAGTTGCAGACCCTCAATCTCGAGAAAATTGTTTGAATGGATATACCTTTTTGTTGGAGTCAAGAAATAAGTATAGACACAAGGACAAGTTGCAACCACTACTGGAAGTGGGTGGTGCAAAAGTTGCTTCCCTGGAAGGTTTCTGCATTGATAGCCAAGTATTGGAGGAAGAAGGAATTAGACATGTGGTAAGGGTAATTCCTACTGGAGCAACCAGCAGTTCAAACGGCTCTCAGAGCATTAGGTCACTGCCTAGTGTAAATGAGATGGATTTGATTTCAGTCGTCTTATCCGGACATCTGGATCCTTTTATCATTGTATCACCTCCTGTGCTTGTCACTTCTTCATGCTCCACAGATGAGACAGTGGTGGCAGAATCTGATGAAGAAGTGGAAACTGCCACAGCCGTTCACACCTCTACTGCTGTCTATTCAGTAGAATCCTCTGAGCATGACAGCAAAGAGATGACAGATCTACATATGATAGAATCCACTCAGCATGATAGCGGAGAAGAAACTGCAATCAATGTAATAGAATCTACTGAAACTGATAGGAAGGGAAATATTACTCTGGCTAGTGTAAATGCCATTGAACATGAGATCAAAGAGGAGATACCATGCAATAATGTGTCCATTAAATGGTCTGAAGGTGCTTCTTTCACTGGCTTGAGGAACAGAGATGGTAGAACAGGATCGAGATTAGAAAAAGTTGAAGAGTCAGAATGTGGGAACGTGGATGTTATATACAGCCAAGATCTTATCGTAAGAGATTCTCTATCAGCATCAGTTCATTCTTCTACAAATGATGCTGTCATAAATTTTAAATGTTTCCGAAAGAGGGAGACTCCGTCTGGAAATAGTTTCAGCAGTCTCATTCCATTCTCAAAGGATCCTTACAAAGAATCGGACTATGGAAATGAGGAAGTAGCTGAATATCTGAAAGAAGAGAAAAAGAGAAAACAAATGGAAGCCTTAGCAGAGGACTTATTTAAATATGAGGTGGGGAGAAGACGGAATGCAGCTGGCTCTCGCACTGGACTTTTTGCTTATACTTGA
Protein:  
MVWGLFPVDPLPGEDRYYFFSKGTYKVGRKGCDIIINKDKGVSRIHAEIVIDEMVCFDNPQRQSSDISSKVRIRDCSKYGTFVKKNLGSKEKVHEFPEKETMLKDGDLVSFGTGNATYRFGYVPFIILYCCSKDLQVREPLRQKILSIGAFVAQEWSLKCTHVLIDDLVPLKEELIDAIVAKKPFISFDWIEFIAGKNICTEIPSYLSYSPTLLLEEASVRVADPQSRENCLNGYTFLLESRNKYRHKDKLQPLLEVGGAKVASLEGFCIDSQVLEEEGIRHVVRVIPTGATSSSNGSQSIRSLPSVNEMDLISVVLSGHLDPFIIVSPPVLVTSSCSTDETVVAESDEEVETATAVHTSTAVYSVESSEHDSKEMTDLHMIESTQHDSGEETAINVIESTETDRKGNITLASVNAIEHEIKEEIPCNNVSIKWSEGASFTGLRNRDGRTGSRLEKVEESECGNVDVIYSQDLIVRDSLSASVHSSTNDAVINFKCFRKRETPSGNSFSSLIPFSKDPYKESDYGNEEVAEYLKEEKKRKQMEALAEDLFKYEVGRRRNAAGSRTGLFAYT